NAR Database

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使用情境

關於

The NAR Database mind map template organizes 1,685 molecular biology databases into 15 categories and 41 subcategories, based on the 2016 Nucleic Acids Research (NAR) online collection. It covers database groupings such as Nucleotide Sequence Databases (including CEGA for non-coding sequences, JuncDB for exon-exon junction sequences, and DFam for human DNA repeat families), Protein sequence databases (Pfam, PDBe), and Metabolic and Signaling Pathways (KEGG, MetaCyc). The template also explains selection criteria, reasons for database loss, and creation motivations. It serves as a comprehensive cheat sheet for bioinformatics researchers and students to navigate the vast landscape of molecular biology databases.

使用條款

何時使用此範本

Bioinformatics researchers and graduate students

When conducting a literature review on molecular biology databases for a research paper or grant proposal.

University professors and instructors

When teaching a course on bioinformatics resources and need a structured overview of major database categories.

Computational biologists and data scientists

When planning a new bioinformatics project and need to identify relevant databases for data analysis or integration.

如何使用此範本

步驟 1

Open and explore the database categories

Open the template in Xmind to navigate through the 15 major categories and 41 subcategories of molecular biology databases.

步驟 2

Review and customize specific node details

Click on individual database nodes like KEGG or Pfam to examine their descriptions and add your own research notes or criteria.

步驟 3

Reorganize and export your bioinformatics map

Tailor the structure to your project needs and export the final map as a PDF or image for use in your reports.

常見問題

What is included in the NAR Database mind map template?

The template includes 1,685 databases organized into 15 categories and 41 subcategories, covering nucleotide sequences, proteins, structures, genomics, pathways, and more. It also lists selection criteria, references, and reasons for database grouping, loss, and creation.

How is the NAR Database template structured?

It is structured with top-level branches like 'Organisation of databases and its major grouping', 'Online Updated Molecular Biology Database Collection 2016', 'Numbers available', 'Criteria for selection', and 'References'. Each branch contains specific database names and descriptions.

Can I customize this NAR Database mind map in Xmind?

Yes, you can open the .xmind file in Xmind and edit any node. You can add new databases, update descriptions, or reorganize categories to fit your research needs.

Is this NAR Database template free to use?

The template is available on Xmind's template marketplace. Pricing depends on Xmind's subscription model; check the marketplace for current availability.

What are the criteria for a database to be included in NAR?

The template lists criteria such as nucleic acid therapeutics, intercellular communication via RNA-containing vesicles, functional roles of RNA modification, single cell gene regulation, and molecular machines.

Why are some databases lost or dropped from the collection?

Databases may be lost due to being outdated, unresponsive, or containing content errors, as noted in the 'Why databases are lose and dropped' branch.

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